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Commit fe3658c0 authored by Fabian Schindler's avatar Fabian Schindler
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Adding additional documentation

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...@@ -27,8 +27,6 @@ author = u'EOX IT Services GmbH' ...@@ -27,8 +27,6 @@ author = u'EOX IT Services GmbH'
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones. # ones.
extensions = [ extensions = [
'recommonmark',
] ]
# Add any paths that contain templates here, relative to this directory. # Add any paths that contain templates here, relative to this directory.
......
.. _ingestion:
Data Ingestion
==============
This section details the data ingestion and later management in the VS.
Redis queues
------------
The central synchronization component in the VS is the redis key-value store.
It provides various queues, which are listened on by the services. For example,
the ``preprocessor`` service instances listen on the ``preprocess_queue`` on
the Redis. Whenever an item is added to the queue, it is eventually consumed by
one of the ``preprocessor`` replicas, which performs the preprocessing. When
completed, it pushes the processed item into the ``register_queue`` which
itself is listened by the ``registrar``.
So via the Redis, the ingestion can be triggered and observed. In order to
eventually start the preprocessing of a product, its path on the configured
object storage has to be pushed onto the ``preprocess_queue``, as will be
explained in detail in this chapter.
As the Redis store is not publicly accessible from outside of the stack. So to
interact with it, the operator has to run a command from one of the services.
Conveniently, the service running Redis also has the ``redis-cli`` tool
installed that lets users interact with the store.
When doing one off commands, it is maybe more convenient to execute it on a
running service. For this, the ``docker ps`` command can be used to select the
identifier of the running docker container of the redis service.
.. code-block:: bash
container_id=$(docker ps -qf "name=<stack-name>_redis")
With this identifier, a command can be issued:
.. code-block:: bash
docker exec -it $container_id redis-cli ...
When performing more than one command, it can be simpler to open a shell on the
service instead:
.. code-block:: bash
docker exec -it $container_id bash
As the container ID may change (for example when the replica is restarted) it
is better to retrieve it for every command instead of relying on a variable:
.. code-block:: bash
docker exec -it $(docker ps -qf "name=<stack-name>_redis")
For the sake of brevity, the next commands in this chaptere are using either of
the above techniques and will just print the final commands inside the redis
container.
.. note::
For the VS, only the ``List`` and ``Set`` `Redis data types
<https://redis.io/topics/data-types>`_ are really used. ``Sets`` are an
unordered collection of string elements. In VS it is used to denote that an
element is part of a particular group, e.g: being preprocessed, or having
failed registration.
``Lists`` are used as a task queue. It is possible to add items to eithre
end of the queue, but by convention items are pushed on the "left" and
popped from the "right" end of the list resulting in a last-in-first-out
(LIFO) queue. It is entirely possible to push elements to the "right" end
as-well, and an operator may want to do so in order to add an element to be
processed as soon as possible instead of waiting before all other elements
before it are processed.
The full list of available commands can be found for both `Lists
<https://redis.io/commands#list>`_ and `Sets
<https://redis.io/commands#set>`_.
For a more concrete example: the following command finds the container ID of
the redis service replica, and executes a ``redis-cli lpush`` command to add a
new path of an object to preprocess on the ``preprocess_queue``:
.. code-block:: bash
redis-cli lpush preprocess_queue "/data25/OA/PL00/1.0/00/urn:eop:DOVE:MULTISPECTRAL_4m:20180811_081455_1054_3be7/0001/PL00_DOV_MS_L3A_20180811T081455_20180811T081455_TOU_1234_3be7.DIMA.tar"
Usually, with a preprocessor service running and no other items in the
``preprocess_queue`` this value will be immediatly popped from the list and
processed. For the sake of demonstration this command would print the contents
of the ``preprocess_queue``:
.. code-block:: bash
$ redis-cli lrange preprocess_queue 0 -1
/data25/OA/PL00/1.0/00/urn:eop:DOVE:MULTISPECTRAL_4m:20180811_081455_1054_3be7/0001/PL00_DOV_MS_L3A_20180811T081455_20180811T081455_TOU_1234_3be7.DIMA.tar
Now that the product is beeing preprocessed, it should be visible in the
``preprocessing_set``. As the name indicates, this is using the ``Set``
datatype, thus requiring the ``SMEMBERS`` subcommand to list:
.. code-block:: bash
$ redis-cli smembers preprocessing_set 0 -1
/data25/OA/PL00/1.0/00/urn:eop:DOVE:MULTISPECTRAL_4m:20180811_081455_1054_3be7/0001/PL00_DOV_MS_L3A_20180811T081455_20180811T081455_TOU_1234_3be7.DIMA.tar
Once the preprocessing of the product is finished, the preprocessor will remove
the currently worked on path from the ``preprocessing_set`` and add it either
to the ``preprocess-success_set`` or the ``preprocess-failure_set`` depending
on whether the processing succeeded or not. They can be inspected using the
same ``SMEMBERS`` subcommand but either name as parameter.
Additionally, upon success, the preprocessor places the same product path on
the ``register_queue``, where it can be inspected with the following command.
.. code-block:: bash
$ redis-cli lrange register_queue 0 -1
/data25/OA/PL00/1.0/00/urn:eop:DOVE:MULTISPECTRAL_4m:20180811_081455_1054_3be7/0001/PL00_DOV_MS_L3A_20180811T081455_20180811T081455_TOU_1234_3be7.DIMA.tar
If an operator wants to trigger the re-registration of a product only the
product path needs to be pushed to this queue:
.. code-block:: bash
redis-cli lpush register_queue "/data25/OA/PL00/1.0/00/urn:eop:DOVE:MULTISPECTRAL_4m:20180811_081455_1054_3be7/0001/PL00_DOV_MS_L3A_20180811T081455_20180811T081455_TOU_1234_3be7.DIMA.tar"
Very similar to the preprocessing, during the registration the product path is
added to the ``registering_set``, afterwards the path is placed to either the
``register-success_set`` or ``register-failure_set``. Again, these queues or
sets can be inspected by the ``LRANGE`` or ``SMEMBERS`` subcommands.
Data Management
---------------
Sometimes it is necessary to directly interact with the registrar/renderer. The
following section shows what tasks on the registrar can be accomplished.
For all intents and purposes in this section it is assumed, that the operator
is logged into a shell on the ``registrar`` service. This can be achieved via
the following command (assuming at least one registrar replica is running):
.. code-block:: bash
docker exec -it $(docker ps -qf "name=<stack-name>_registrar") bash
The contents of the shared registrar/renderer database can be managed using
the registrars instance ``manage.py`` script. For brevity, the following bash
alias is assumed:
.. code-block:: bash
alias manage.py='python3 ..../manage.py' # TODO
Manual Data Registration
------------------------
.. warning::
This approach is not recommended for production use, as it circumvents the
Redis sets to track what products have been registered and where the
registration failed.
Collection Management
---------------------
A collection is a grouping of earth observation products, accessible as a
single entity via various service endpoints. Depending on the configuration,
multiple collections are created when the service is set up. They can be listed
using the ``collection list`` command.
New collections can be created using the ``collection create`` command. This
can refer to a ``Collection Type``, which will restrict the collection in terms
of insertable products: only products of an allowed ``Product Type`` can be
added. Detailed information about the available Collection management commands
can be found in the `CLI documentation <https://docs.eoxserver.org/en/master/users/coverages.html#command-line-interfaces>`__.
Collections can be deleted, without affecting the contained products.
.. warning::
Since the other services have fixed configuration and depend on specific
collection, deleting said collections without a replacement can lead to
service disruptions.
In certain scenarios it may be useful, to add specific products to or exclude
them from a collection. For this, the Product identifier needs to be known. To
find out the Product identifier, either the OpenSearch on an existing
collection or the CLI command ``id list`` can be used.
When the identifier is obtained, the following management command inserts a
product into a collection:
.. code-block:: bash
manage.py collection insert <collection-id> <product-id>
Multiple products can be inserted in one pass by providing more than one
identifier.
The reverse command excludes a product from a collection:
.. code-block:: bash
manage.py collection exclude <collection-id> <product-id>
Again, multiple products can be excluded in a single call.
.. _management:
Service Management
==================
This section shows how a deployed VS stack can be interacted with.
Scaling
-------
Scaling is a handy tool to ensure stable performance, even when dealing with
higher usage on either service. For example, the preprocessor and registrar can
be scaled to a higher replica count to enable a better throughput when
ingesting data into the VS.
The following command scales the ``renderer`` service to 5 replicas:
.. code-block:: bash
docker service scale <stack-name>_renderer=5
A service can also be scaled to zero replicas, effectively disabling the
service.
.. warning::
The ``redis`` and ``database`` should never be scaled (their replica count
should remain 1) as this can lead to service disruptions and corrupted data.
Updating Images
---------------
Updating the service software is done using previously established tools. To
update the service in question, it needs to be scaled to zero replicas. Then
the new image can be pulled, and the service can be scaled back to its original
value. This forces the start of the service from the newly fetched image.
Operator Guide Operator Guide
============== ==============
TODO
.. toctree::
:maxdepth: 3
management
ingestion
Admin Admin
......
...@@ -72,3 +72,59 @@ Additional information for swarm management can be obtained in the official ...@@ -72,3 +72,59 @@ Additional information for swarm management can be obtained in the official
documentation of the project: documentation of the project:
https://docs.docker.com/engine/reference/commandline/swarm/ https://docs.docker.com/engine/reference/commandline/swarm/
Image retrieval
---------------
Before the Docker images can be used, they have to be retrieved first. With
images from the default repository, this happens automatically. When private
repositories are used, they need to be configured beforehand.
Currently, all images used in VS that are not off-the-shelf are hosted on the
``registry.gitlab.eox.at`` registry. It can be configured to be used with this
command with the correct username and password filled in:
.. code-block:: bash
docker login -u <username> -p <password> registry.gitlab.eox.at
Now the relevant images can be pulled:
.. code-block:: bash
docker pull registry.gitlab.eox.at/esa/prism/vs/pvs_core
docker pull registry.gitlab.eox.at/esa/prism/vs/pvs_cache
docker pull registry.gitlab.eox.at/esa/prism/vs/pvs_preprocessor
docker pull registry.gitlab.eox.at/esa/prism/vs/pvs_client
# TODO: ingestor image?
Stack Deployment
----------------
Now that a Docker Swarm is established, it is time to deploy the VS as a stack.
This is done using the created Docker Compose configuration files. In order to
enhance the re-usability, these files are split into multiple parts to be used
for both development and final service deployment.
For a development deployment one would do (replace ``name`` with the actual
service identifier:
.. code-block:: bash
docker stack deploy -c docker-compose.<name>.yml -c docker-compose.<name>.dev.yml <name>-pdas
This command actually performs a variety of tasks. First off, it obtains any
missing images, such as the image for the reverse proxy, the database or the
redis key-value store.
When all relevant images are pulled from their respective repository the
services of the stack are initialized. In the default setting, each service is
represented by a single container of its respective service type. When starting
for the first time, the startup procedure takes some time, as everything needs
to be initialized. This includes the creation of the database, user,
required tables and the Django instance.
That process can be supervised using the ``docker service ls`` command, which
lists all available services and their respective status.
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